[TRANSLATION_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [META] SPECIES.DISPLAY_NAME = Agraulis vanillae GENEBUILD.START_DATE = 116-11 GENEBUILD.METHOD = import SPECIES.DIVISION = EnsemblMetazoa SPECIES.TAXONOMY_ID = 40039 SPECIES.COMMON_NAME = GENEBUILD.VERSION = 1 PROVIDER.NAME = Heliconius Genome Sequencing Consortium SPECIES.URL = Agraulis_vanillae_helico3 SPECIES.SCIENTIFIC_NAME = Agraulis vanillae SPECIES.ALIAS = ASSEMBLY.DEFAULT = helico3 SPECIES.PRODUCTION_NAME = Agraulis_vanillae_helico3 ASSEMBLY.NAME = helico3 SPECIES.BIOPROJECT = PROVIDER.URL = http://mallet.oeb.harvard.edu ASSEMBLY.DATE = 2016-08-03 GENEBUILD.ID = 1 ASSEMBLY.ACCESSION = [GFF] CONDITION10 = [ EXPECTATION transcript hasParent gene force ] CHUNK = [ change region ] CONDITION5 = [ EXPECTATION cds hasParent mrna force ] CONDITION7 = [ EXPECTATION mrna hasParent gene force ] CONDITION9 = [ EXPECTATION trna hasParent gene force ] CONDITION6 = [ EXPECTATION exon hasParent transcript|mrna|trna|ncrna force ] CONDITION8 = [ EXPECTATION ncrna hasParent gene force ] SORT = 1 CONDITION4 = [ EXPECTATION cds hasSister exon force ] CONDITION11 = [ EXPECTATION cds|exon|mrna|transcript|trna|ncrna|gene <=[_start,_end] SELF warn ] CONDITION1 = [ MULTILINE CDS ] CONDITION3 = [ MULTILINE match ] CONDITION2 = [ MULTILINE cDNA_match ] [FILES] ; PROTEIN = SCAFFOLD = [ fa http://download.lepbase.org/v4/provider/Agraulis_vanillae.fasta.gz ] ; GFF = ; CONTIG = [GENE_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [TRANSCRIPT_STABLE_IDS] GFF = [ SELF->ID /(.+)/ ] [MODIFY] TRUNCATE_SEQUENCE_TABLES = 1 TRUNCATE_GENE_TABLES = 1 OVERWRITE_DB = 1