WARNING executed HMMER version has not been tested !!! 

#      Statistics of the completeness of the genome based on 248 CEGs      #

              #Prots  %Completeness  -  #Total  Average  %Ortho 

  Complete      216       87.10      -   294     1.36     28.24

   Group 1       58       87.88      -    73     1.26     24.14
   Group 2       48       85.71      -    68     1.42     25.00
   Group 3       51       83.61      -    71     1.39     33.33
   Group 4       59       90.77      -    82     1.39     30.51

   Partial      240       96.77      -   373     1.55     39.58

   Group 1       65       98.48      -    91     1.40     32.31
   Group 2       55       98.21      -    88     1.60     38.18
   Group 3       57       93.44      -    97     1.70     45.61
   Group 4       63       96.92      -    97     1.54     42.86

#    These results are based on the set of genes selected by Genis Parra   #

#    Key:                                                                  #
#    Prots = number of 248 ultra-conserved CEGs present in genome          #
#    %Completeness = percentage of 248 ultra-conserved CEGs present        #
#    Total = total number of CEGs present including putative orthologs     #
#    Average = average number of orthologs per CEG                         #
#    %Ortho = percentage of detected CEGS that have more than 1 ortholog   #


#Listing missing proteins in each category

# Category: Complete 
KOG0188
KOG0211
KOG0291
KOG0292
KOG0361
KOG0364
KOG0477
KOG0524
KOG0650
KOG0688
KOG0729
KOG0741
KOG0948
KOG0964
KOG0969
KOG1058
KOG1137
KOG1145
KOG1185
KOG1358
KOG1374
KOG1468
KOG1795
KOG1936
KOG2004
KOG2303
KOG2415
KOG2531
KOG2703
KOG3222
KOG3405
KOG3855

# Category: Partial 
KOG0188
KOG0364
KOG0729
KOG0969
KOG1374
KOG2531
KOG3222
KOG3405